A new coronavirus, causing a severe acute respiratory syndrome (COVID-19), was started at Wuhan, China, in December 2019. The epidemic has rapidly spread across the world becoming a pandemic that, as of today, has affected more than 70 million people causing over 2 million deaths. To better understand the evolution of spread of the COVID-19 pandemic, we developed PANC (Parallel Network Analysis and Communities Detection), a new parallel preprocessing methodology for network-based analysis and communities detection on Italian COVID-19 data. The goal of the methodology is to analyze set of homogeneous datasets (i.e. COVID-19 data in several regions) using a statistical test to find similar/dissimilar behaviours, mapping such similarity information on a graph and then using community detection algorithm to visualize and analyze the initial dataset. The methodology includes the following steps: (i) a parallel methodology to build similarity matrices that represent similar or dissimilar regions with respect to data; (ii) an effective workload balancing function to improve performance; (iii) the mapping of similarity matrices into networks where nodes represent Italian regions, and edges represent similarity relationships; (iv) the discovering and visualization of communities of regions that show similar behaviour. The methodology is general and can be applied to world-wide data about COVID-19, as well as to all types of data sets in tabular and matrix format. To estimate the scalability with increasing workloads, we analyzed three synthetic COVID-19 datasets with the size of 90.0MB, 180.0MB, and 360.0MB. Experiments was performed on showing the amount of data that can be analyzed in a given amount of time increases almost linearly with the number of computing resources available. Instead, to perform communities detection, we employed the real data set.
Parallel Network Analysis and Communities Detection (PANC) Pipeline for the Analysis and Visualization of COVID-19 Data
Agapito G.;Milano M.;Cannataro M.
2021-01-01
Abstract
A new coronavirus, causing a severe acute respiratory syndrome (COVID-19), was started at Wuhan, China, in December 2019. The epidemic has rapidly spread across the world becoming a pandemic that, as of today, has affected more than 70 million people causing over 2 million deaths. To better understand the evolution of spread of the COVID-19 pandemic, we developed PANC (Parallel Network Analysis and Communities Detection), a new parallel preprocessing methodology for network-based analysis and communities detection on Italian COVID-19 data. The goal of the methodology is to analyze set of homogeneous datasets (i.e. COVID-19 data in several regions) using a statistical test to find similar/dissimilar behaviours, mapping such similarity information on a graph and then using community detection algorithm to visualize and analyze the initial dataset. The methodology includes the following steps: (i) a parallel methodology to build similarity matrices that represent similar or dissimilar regions with respect to data; (ii) an effective workload balancing function to improve performance; (iii) the mapping of similarity matrices into networks where nodes represent Italian regions, and edges represent similarity relationships; (iv) the discovering and visualization of communities of regions that show similar behaviour. The methodology is general and can be applied to world-wide data about COVID-19, as well as to all types of data sets in tabular and matrix format. To estimate the scalability with increasing workloads, we analyzed three synthetic COVID-19 datasets with the size of 90.0MB, 180.0MB, and 360.0MB. Experiments was performed on showing the amount of data that can be analyzed in a given amount of time increases almost linearly with the number of computing resources available. Instead, to perform communities detection, we employed the real data set.I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.